Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 AC068338.2-201ENST00000563278 1430 ntBASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 AC005332.8-201ENST00000622750 2735 ntBASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 AC069236.1-201ENST00000604339 616 ntBASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 NOC2LP1-202ENST00000452600 2235 ntBASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV27A0A0K0K1C4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 NOC2LP2-201ENST00000407594 1944 ntBASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRBV27A0A0K0K1C4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 AC104417.2-201ENST00000562989 1793 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms