Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 AL138781.2-201ENST00000617896 1843 ntBASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV21A0A0B4J279 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 AC133552.2-202ENST00000575694 574 ntBASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 ZNF815P-204ENST00000434898 1737 ntBASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV21A0A0B4J279 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 AL161938.1-201ENST00000569833 2180 ntBASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 AC073210.2-201ENST00000430369 194 ntBASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms