Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 AC010203.1-204ENST00000548782 407 ntBASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRGV5A0A0B4J1U4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 HMGA1P5-201ENST00000412453 271 ntBASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 TSPY17P-201ENST00000450329 467 ntBASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 CKBP1-201ENST00000565489 1086 ntBASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 FAM87A-204ENST00000613235 858 ntBASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRGV5A0A0B4J1U4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 CA15P1-201ENST00000481698 905 ntBASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 PRSS44-201ENST00000515154 1146 ntBASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 AC010653.2-201ENST00000623505 997 ntBASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.31■□□□□ 0.36
TRGV5A0A0B4J1U4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 ZNF815P-204ENST00000434898 1737 ntBASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 AC007663.1-201ENST00000438948 1240 ntBASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 AL590326.2-201ENST00000625139 305 ntBASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms