Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ID1-201ENST00000376105 1233 ntBASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC105020.6-201ENST00000621523 1217 ntBASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC005082.1-201ENST00000413042 2259 ntBASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 BX119927.1-201ENST00000636596 1552 ntBASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 KRT8P36-201ENST00000489121 1440 ntBASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 MIPEPP3-201ENST00000412105 444 ntBASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 AC092118.2-201ENST00000613495 667 ntBASIC13.67□□□□□ -0.22
TRAV8-3A0A0A6YYJ7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms