Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RPS4XP11-201ENST00000446897 772 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC009567.2-201ENST00000502989 349 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 LINC01605-202ENST00000519738 733 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC109635.1-201ENST00000529200 490 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC005363.1-201ENST00000530779 351 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 SSU72P6-201ENST00000532644 488 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC012309.2-201ENST00000587645 319 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RPSAP57-201ENST00000590033 832 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RMRP-201ENST00000602361 268 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC011944.2-201ENST00000624440 683 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC005086.2-201ENST00000624939 228 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 ZNF322-207ENST00000607204 4737 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 TTPAL-202ENST00000372904 6234 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 SP1-201ENST00000327443 2846 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AC134508.1-201ENST00000570082 2977 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 PTCH1-206ENST00000421141 7659 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 GABRB3-201ENST00000299267 4494 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 PSENEN-201ENST00000222266 603 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 KRTAP20-3-201ENST00000382826 273 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AL121916.1-201ENST00000429405 308 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AL445584.1-201ENST00000431451 330 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AC242426.2-201ENST00000446956 795 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 COTL1P2-201ENST00000455360 352 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 RN7SL151P-201ENST00000460537 283 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 RN7SL834P-201ENST00000461450 286 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 RPL12P38-201ENST00000471280 490 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 RPL34P17-201ENST00000472160 347 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AP001024.1-201ENST00000474540 345 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 RN7SL461P-201ENST00000484915 282 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AC097535.2-201ENST00000507715 142 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AC011604.1-201ENST00000545978 196 ntBASIC4.78□□□□□ -1.64
KRTAP3-3Q9BYR6 AC009088.4-201ENST00000575892 280 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms