Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF561-201ENST00000302851 4693 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 VIT-201ENST00000379241 2525 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF223-201ENST00000434772 2418 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL360294.1-201ENST00000640945 2438 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF774-202ENST00000379090 5613 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 OSBPL2-202ENST00000358053 3936 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 ZBTB37-204ENST00000427304 2300 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 XRCC6-203ENST00000402580 2006 ntTSL 2 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 SELP-206ENST00000458599 1945 ntTSL 5 BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP4-4Q9BYR3 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01964-201ENST00000567718 3137 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AC122688.4-201ENST00000623279 4394 ntBASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 SOX9-AS1-204ENST00000434703 3032 ntTSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 TACC1-204ENST00000518415 3011 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 PDE11A-202ENST00000389683 1781 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AP000977.1-201ENST00000501964 2908 ntTSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 HSPD1P4-201ENST00000547203 1702 ntBASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 NCAM1-213ENST00000531044 2826 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 PKMP5-201ENST00000454707 1601 ntBASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 POTEKP-201ENST00000397487 2688 ntBASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AC008895.1-201ENST00000624074 2622 ntBASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AC007342.6-201ENST00000624289 2594 ntBASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 ACVR2B-AS1-201ENST00000441531 2517 ntTSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms