Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXP3Q9BZS1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXP3Q9BZS1 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXP3Q9BZS1 LINC00561-201ENST00000565815 2738 ntBASIC5.83□□□□□ -1.48
FOXP3Q9BZS1 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXP3Q9BZS1 AC117529.2-201ENST00000512159 2068 ntBASIC5.83□□□□□ -1.48
FOXP3Q9BZS1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 PARP4P2-201ENST00000446672 3326 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC079097.1-201ENST00000512187 1399 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RNU6-216P-201ENST00000363282 104 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 OR7E101P-201ENST00000400428 513 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 GSTA9P-201ENST00000406231 611 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 TMBIM7P-201ENST00000418074 855 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 C1DP2-201ENST00000418167 426 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RIMKLBP2-201ENST00000424737 654 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 PRUNEP1-201ENST00000425846 705 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC073335.1-201ENST00000427776 363 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 ELOCP14-201ENST00000428070 331 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RPL7P56-201ENST00000429441 717 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC073464.1-201ENST00000429823 534 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RPL7P4-203ENST00000430239 730 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RPL7P11-201ENST00000437586 658 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 CACYBPP1-201ENST00000438592 684 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 ELOCP7-201ENST00000439968 331 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AP000281.1-201ENST00000444036 316 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RPL26P28-201ENST00000451325 435 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 VDAC2P4-201ENST00000452925 711 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC015724.1-201ENST00000478577 156 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RN7SL570P-201ENST00000484405 292 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RPS27P23-201ENST00000487608 251 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC009646.1-201ENST00000510455 318 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC025465.4-201ENST00000513422 638 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 SNORA18.6-201ENST00000516792 115 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 OR8L1P-201ENST00000534005 955 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AK6P1-201ENST00000540219 478 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 HMGB1P33-201ENST00000563485 527 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC019322.1-201ENST00000571869 389 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC064836.2-201ENST00000609491 462 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC055764.2-201ENST00000610089 670 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RNA5SP440-201ENST00000612665 119 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC243756.2-201ENST00000618406 463 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC018926.3-201ENST00000618841 406 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AL022311.1-201ENST00000623726 19416 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC027088.4-201ENST00000611559 1947 ntBASIC5.82□□□□□ -1.48
FOXP3Q9BZS1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AP000473.2-201ENST00000602659 1537 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 IGKV7-3-201ENST00000357453 298 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 Y_RNA.25-201ENST00000362528 102 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 RNU6-249P-201ENST00000363016 102 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 Y_RNA.535-201ENST00000384612 99 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 MT-TD-201ENST00000387419 68 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms