RNA–Protein interactions for RNA: ENST00000431897.1

LINC01935-201, Transcript of long intergenic non-protein coding RNA 1935, humanhuman

TSL 3 BASIC

Gene LINC01935, Length 437 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01935-201ENST00000431897 AEBP2Q6ZN18 517 aaPredicted RBP21.28■■□□□ 1
LINC01935-201ENST00000431897 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.89
LINC01935-201ENST00000431897 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
LINC01935-201ENST00000431897 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
LINC01935-201ENST00000431897 FOXD1Q16676 465 aa16.77■□□□□ 0.28
LINC01935-201ENST00000431897 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
LINC01935-201ENST00000431897 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
LINC01935-201ENST00000431897 ADRA2BP18089 450 aa16■□□□□ 0.15
LINC01935-201ENST00000431897 PIAS4Q8N2W9 510 aaPredicted RBP15.71■□□□□ 0.11
LINC01935-201ENST00000431897 MSH5O43196 834 aa15.48■□□□□ 0.07
LINC01935-201ENST00000431897 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
LINC01935-201ENST00000431897 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
LINC01935-201ENST00000431897 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
LINC01935-201ENST00000431897 DMRT2Q9Y5R5 561 aa14.4□□□□□ -0.1
LINC01935-201ENST00000431897 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
LINC01935-201ENST00000431897 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
LINC01935-201ENST00000431897 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
LINC01935-201ENST00000431897 KCNA4P22459 653 aa14.21□□□□□ -0.13
LINC01935-201ENST00000431897 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
LINC01935-201ENST00000431897 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
LINC01935-201ENST00000431897 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
LINC01935-201ENST00000431897 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
LINC01935-201ENST00000431897 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
LINC01935-201ENST00000431897 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
LINC01935-201ENST00000431897 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
LINC01935-201ENST00000431897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC01935-201ENST00000431897 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
LINC01935-201ENST00000431897 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
LINC01935-201ENST00000431897 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
LINC01935-201ENST00000431897 ZBTB22O15209 634 aa13.1□□□□□ -0.31
LINC01935-201ENST00000431897 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
LINC01935-201ENST00000431897 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
LINC01935-201ENST00000431897 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
LINC01935-201ENST00000431897 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
LINC01935-201ENST00000431897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.34
LINC01935-201ENST00000431897 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
LINC01935-201ENST00000431897 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
LINC01935-201ENST00000431897 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
LINC01935-201ENST00000431897 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
LINC01935-201ENST00000431897 APLP2Q06481 763 aa12.76□□□□□ -0.37
LINC01935-201ENST00000431897 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
LINC01935-201ENST00000431897 CAPN15O75808 1086 aa12.69□□□□□ -0.38
LINC01935-201ENST00000431897 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
LINC01935-201ENST00000431897 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
LINC01935-201ENST00000431897 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
LINC01935-201ENST00000431897 DSG3P32926 999 aa12.6□□□□□ -0.39
LINC01935-201ENST00000431897 ABCB7O75027 752 aa12.44□□□□□ -0.42
LINC01935-201ENST00000431897 POLA2Q14181 598 aa12.42□□□□□ -0.42
LINC01935-201ENST00000431897 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
LINC01935-201ENST00000431897 MKRN4PQ13434 485 aaPredicted RBP12.13□□□□□ -0.47
LINC01935-201ENST00000431897 FBLN2P98095 1184 aa12.07□□□□□ -0.48
LINC01935-201ENST00000431897 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
LINC01935-201ENST00000431897 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
LINC01935-201ENST00000431897 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
LINC01935-201ENST00000431897 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
LINC01935-201ENST00000431897 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
LINC01935-201ENST00000431897 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
LINC01935-201ENST00000431897 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
LINC01935-201ENST00000431897 ZNF692Q9BU19 519 aaPredicted RBP11.79□□□□□ -0.52
LINC01935-201ENST00000431897 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
LINC01935-201ENST00000431897 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
LINC01935-201ENST00000431897 PROM2Q8N271 834 aa11.64□□□□□ -0.55
LINC01935-201ENST00000431897 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC01935-201ENST00000431897 FKBP8Q14318 412 aa11.61□□□□□ -0.55
LINC01935-201ENST00000431897 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
LINC01935-201ENST00000431897 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
LINC01935-201ENST00000431897 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
LINC01935-201ENST00000431897 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
LINC01935-201ENST00000431897 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
LINC01935-201ENST00000431897 FXR2P51116 673 aaKnown RBP eCLIP11.42□□□□□ -0.58
LINC01935-201ENST00000431897 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
LINC01935-201ENST00000431897 PRR29P0C7W0 189 aa11.35□□□□□ -0.59
LINC01935-201ENST00000431897 POTEHQ6S545 545 aa11.3□□□□□ -0.6
LINC01935-201ENST00000431897 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
LINC01935-201ENST00000431897 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
LINC01935-201ENST00000431897 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
LINC01935-201ENST00000431897 CHADLQ6NUI6 762 aa11.21□□□□□ -0.61
LINC01935-201ENST00000431897 MNX1P50219 401 aaPredicted RBP11.15□□□□□ -0.62
LINC01935-201ENST00000431897 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
LINC01935-201ENST00000431897 MIER1Q8N108 512 aa11.12□□□□□ -0.63
LINC01935-201ENST00000431897 VASPP50552 380 aaPredicted RBP11.1□□□□□ -0.63
LINC01935-201ENST00000431897 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
LINC01935-201ENST00000431897 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
LINC01935-201ENST00000431897 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
LINC01935-201ENST00000431897 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
LINC01935-201ENST00000431897 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
LINC01935-201ENST00000431897 HAX1O00165 279 aa10.97□□□□□ -0.65
LINC01935-201ENST00000431897 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
LINC01935-201ENST00000431897 EVX2Q03828 476 aa10.96□□□□□ -0.65
LINC01935-201ENST00000431897 NUBP1P53384 320 aa10.93□□□□□ -0.66
LINC01935-201ENST00000431897 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
LINC01935-201ENST00000431897 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
LINC01935-201ENST00000431897 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
LINC01935-201ENST00000431897 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
LINC01935-201ENST00000431897 SPOCK2Q92563 424 aa10.83□□□□□ -0.68
LINC01935-201ENST00000431897 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
LINC01935-201ENST00000431897 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
LINC01935-201ENST00000431897 SP7Q8TDD2 431 aaPredicted RBP10.81□□□□□ -0.68
LINC01935-201ENST00000431897 CCDC61Q9Y6R9 512 aa10.8□□□□□ -0.68
LINC01935-201ENST00000431897 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms