Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 LAPTM4BP2-201ENST00000604542 446 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 Z95327.3-201ENST00000610385 572 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC109809.1-201ENST00000619665 545 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 OR4K17-201ENST00000315543 1032 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RN7SKP74-201ENST00000362849 309 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 Z98749.2-208ENST00000381646 500 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MIR1255A-201ENST00000408338 113 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RNA5SP251-201ENST00000410614 137 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 CDK7P1-201ENST00000434574 693 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AL500522.2-201ENST00000448562 343 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 HMGB3P21-201ENST00000452483 547 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 VDAC2P4-201ENST00000452925 711 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC092647.2-201ENST00000452998 253 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AMD1P1-201ENST00000457220 922 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC092798.1-201ENST00000458542 409 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC091179.1-201ENST00000461606 579 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RPL9P9-202ENST00000466501 579 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC011276.1-201ENST00000469688 323 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AL136126.1-201ENST00000473603 402 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RNA5SP464-201ENST00000516251 108 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RNU6-1271P-201ENST00000517049 105 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RNU6-1003P-201ENST00000517099 105 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AL592295.2-201ENST00000612578 206 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 EDA-213ENST00000616899 4643 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 Y_RNA.369-201ENST00000365568 117 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AL049697.2-201ENST00000403708 294 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AL353626.3-201ENST00000413399 657 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 USP9YP26-201ENST00000421008 661 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC1.68□□□□□ -2.14
HMCN1Q96RW7 RPS27AP12-201ENST00000429552 465 ntBASIC1.68□□□□□ -2.14
HMCN1Q96RW7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms