RNA–Protein interactions for RNA: ENST00000517099.1

RNU6-1003P-201, Transcript of RNA, U6 small nuclear 1003, pseudogene, humanhuman

BASIC

Gene RNU6-1003P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1003P-201ENST00000517099 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
RNU6-1003P-201ENST00000517099 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
RNU6-1003P-201ENST00000517099 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
RNU6-1003P-201ENST00000517099 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
RNU6-1003P-201ENST00000517099 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
RNU6-1003P-201ENST00000517099 FOXD1Q16676 465 aa15.65■□□□□ 0.1
RNU6-1003P-201ENST00000517099 MSH5O43196 834 aa14.99□□□□□ -0.01
RNU6-1003P-201ENST00000517099 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
RNU6-1003P-201ENST00000517099 PIAS4Q8N2W9 510 aaPredicted RBP14.47□□□□□ -0.09
RNU6-1003P-201ENST00000517099 ADRA2BP18089 450 aa14.12□□□□□ -0.15
RNU6-1003P-201ENST00000517099 PPP6R1Q9UPN7 881 aa14.12□□□□□ -0.15
RNU6-1003P-201ENST00000517099 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
RNU6-1003P-201ENST00000517099 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
RNU6-1003P-201ENST00000517099 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
RNU6-1003P-201ENST00000517099 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
RNU6-1003P-201ENST00000517099 KCNA4P22459 653 aa12.97□□□□□ -0.33
RNU6-1003P-201ENST00000517099 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
RNU6-1003P-201ENST00000517099 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
RNU6-1003P-201ENST00000517099 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
RNU6-1003P-201ENST00000517099 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
RNU6-1003P-201ENST00000517099 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
RNU6-1003P-201ENST00000517099 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
RNU6-1003P-201ENST00000517099 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
RNU6-1003P-201ENST00000517099 HOXD11P31277 338 aaPredicted RBP12.38□□□□□ -0.43
RNU6-1003P-201ENST00000517099 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
RNU6-1003P-201ENST00000517099 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
RNU6-1003P-201ENST00000517099 POTEHQ6S545 545 aa12.28□□□□□ -0.44
RNU6-1003P-201ENST00000517099 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
RNU6-1003P-201ENST00000517099 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.46
RNU6-1003P-201ENST00000517099 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
RNU6-1003P-201ENST00000517099 ZBTB22O15209 634 aa11.95□□□□□ -0.5
RNU6-1003P-201ENST00000517099 SLC4A2P04920 1241 aa11.87□□□□□ -0.51
RNU6-1003P-201ENST00000517099 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
RNU6-1003P-201ENST00000517099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
RNU6-1003P-201ENST00000517099 DSG3P32926 999 aa11.63□□□□□ -0.55
RNU6-1003P-201ENST00000517099 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
RNU6-1003P-201ENST00000517099 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
RNU6-1003P-201ENST00000517099 CAPN15O75808 1086 aa11.54□□□□□ -0.56
RNU6-1003P-201ENST00000517099 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
RNU6-1003P-201ENST00000517099 ATF5Q9Y2D1 282 aaPredicted RBP11.37□□□□□ -0.59
RNU6-1003P-201ENST00000517099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
RNU6-1003P-201ENST00000517099 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
RNU6-1003P-201ENST00000517099 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
RNU6-1003P-201ENST00000517099 SAMD1Q6SPF0 538 aaPredicted RBP11.35□□□□□ -0.59
RNU6-1003P-201ENST00000517099 APLP2Q06481 763 aa11.2□□□□□ -0.62
RNU6-1003P-201ENST00000517099 ABCB7O75027 752 aa11.18□□□□□ -0.62
RNU6-1003P-201ENST00000517099 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
RNU6-1003P-201ENST00000517099 RBM42Q9BTD8 480 aaKnown RBP11.18□□□□□ -0.62
RNU6-1003P-201ENST00000517099 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
RNU6-1003P-201ENST00000517099 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
RNU6-1003P-201ENST00000517099 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
RNU6-1003P-201ENST00000517099 POLA2Q14181 598 aa11□□□□□ -0.65
RNU6-1003P-201ENST00000517099 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
RNU6-1003P-201ENST00000517099 FKBP8Q14318 412 aa10.83□□□□□ -0.68
RNU6-1003P-201ENST00000517099 FBLN2P98095 1184 aa10.78□□□□□ -0.68
RNU6-1003P-201ENST00000517099 HAX1O00165 279 aa10.77□□□□□ -0.69
RNU6-1003P-201ENST00000517099 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
RNU6-1003P-201ENST00000517099 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
RNU6-1003P-201ENST00000517099 ZBTB12Q9Y330 459 aaPredicted RBP10.71□□□□□ -0.69
RNU6-1003P-201ENST00000517099 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
RNU6-1003P-201ENST00000517099 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
RNU6-1003P-201ENST00000517099 REM2Q8IYK8 340 aaPredicted RBP10.61□□□□□ -0.71
RNU6-1003P-201ENST00000517099 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
RNU6-1003P-201ENST00000517099 EVX2Q03828 476 aa10.52□□□□□ -0.73
RNU6-1003P-201ENST00000517099 ZNF692Q9BU19 519 aaPredicted RBP10.52□□□□□ -0.73
RNU6-1003P-201ENST00000517099 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
RNU6-1003P-201ENST00000517099 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
RNU6-1003P-201ENST00000517099 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
RNU6-1003P-201ENST00000517099 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
RNU6-1003P-201ENST00000517099 LHX8Q68G74 356 aa10.47□□□□□ -0.73
RNU6-1003P-201ENST00000517099 PROM2Q8N271 834 aa10.43□□□□□ -0.74
RNU6-1003P-201ENST00000517099 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
RNU6-1003P-201ENST00000517099 PLSCR2Q9NRY7 297 aa10.41□□□□□ -0.74
RNU6-1003P-201ENST00000517099 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
RNU6-1003P-201ENST00000517099 FBXO3Q9UK99 471 aa10.32□□□□□ -0.76
RNU6-1003P-201ENST00000517099 GABBR2O75899 941 aa10.28□□□□□ -0.76
RNU6-1003P-201ENST00000517099 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
RNU6-1003P-201ENST00000517099 PRKAR2AP13861 404 aaKnown RBP10.23□□□□□ -0.77
RNU6-1003P-201ENST00000517099 VASPP50552 380 aaPredicted RBP10.22□□□□□ -0.77
RNU6-1003P-201ENST00000517099 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
RNU6-1003P-201ENST00000517099 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
RNU6-1003P-201ENST00000517099 SPDYE1Q8NFV5 336 aaPredicted RBP10.14□□□□□ -0.79
RNU6-1003P-201ENST00000517099 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
RNU6-1003P-201ENST00000517099 MIER1Q8N108 512 aa10.11□□□□□ -0.79
RNU6-1003P-201ENST00000517099 RTN4Q9NQC3 1192 aaKnown RBP10.11□□□□□ -0.79
RNU6-1003P-201ENST00000517099 PLCD3Q8N3E9 789 aa10.1□□□□□ -0.79
RNU6-1003P-201ENST00000517099 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
RNU6-1003P-201ENST00000517099 KLHL34Q8N239 644 aa10.05□□□□□ -0.8
RNU6-1003P-201ENST00000517099 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1003P-201ENST00000517099 POTEIP0CG38 1075 aa10.03□□□□□ -0.8
RNU6-1003P-201ENST00000517099 PLEKHG5O94827 1062 aa9.97□□□□□ -0.81
RNU6-1003P-201ENST00000517099 CREBZFQ9NS37 354 aa9.97□□□□□ -0.81
RNU6-1003P-201ENST00000517099 CLCN6P51797 869 aa9.96□□□□□ -0.82
RNU6-1003P-201ENST00000517099 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
RNU6-1003P-201ENST00000517099 SPOCK2Q92563 424 aa9.94□□□□□ -0.82
RNU6-1003P-201ENST00000517099 POTEMA6NI47 508 aa9.89□□□□□ -0.83
RNU6-1003P-201ENST00000517099 DCBLD2Q96PD2 775 aa9.89□□□□□ -0.83
RNU6-1003P-201ENST00000517099 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
RNU6-1003P-201ENST00000517099 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
RNU6-1003P-201ENST00000517099 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms