Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.25■□□□□ 0.03
S4R3C0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.25■□□□□ 0.03
S4R3C0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
S4R3C0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.25■□□□□ 0.03
S4R3C0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
S4R3C0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.25■□□□□ 0.03
S4R3C0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.25■□□□□ 0.03
S4R3C0 AC233263.1-201ENST00000578059 224 ntBASIC15.25■□□□□ 0.03
S4R3C0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 AC008403.3-201ENST00000598924 454 ntBASIC15.25■□□□□ 0.03
S4R3C0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.25■□□□□ 0.03
S4R3C0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.25■□□□□ 0.03
S4R3C0 AP006587.1-201ENST00000534129 1502 ntBASIC15.25■□□□□ 0.03
S4R3C0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.25■□□□□ 0.03
S4R3C0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.25■□□□□ 0.03
S4R3C0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
S4R3C0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
S4R3C0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S4R3C0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
S4R3C0 HTR7P1-202ENST00000624664 4411 ntBASIC15.25■□□□□ 0.03
S4R3C0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
S4R3C0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.24■□□□□ 0.03
S4R3C0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.24■□□□□ 0.03
S4R3C0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 AP003097.1-201ENST00000530657 1135 ntBASIC15.24■□□□□ 0.03
S4R3C0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.24■□□□□ 0.03
S4R3C0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.24■□□□□ 0.03
S4R3C0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.24■□□□□ 0.03
S4R3C0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
S4R3C0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
S4R3C0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.24■□□□□ 0.03
S4R3C0 AL032819.2-201ENST00000624543 2162 ntBASIC15.24■□□□□ 0.03
S4R3C0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.23■□□□□ 0.03
S4R3C0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.23■□□□□ 0.03
S4R3C0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
S4R3C0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.23■□□□□ 0.03
S4R3C0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.23■□□□□ 0.03
S4R3C0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.23■□□□□ 0.03
S4R3C0 POM121L13P-201ENST00000422362 380 ntBASIC15.23■□□□□ 0.03
S4R3C0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.23■□□□□ 0.03
S4R3C0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
S4R3C0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.23■□□□□ 0.03
S4R3C0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.23■□□□□ 0.03
S4R3C0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.23■□□□□ 0.03
S4R3C0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.23■□□□□ 0.03
S4R3C0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.23■□□□□ 0.03
S4R3C0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
S4R3C0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
S4R3C0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.23■□□□□ 0.03
S4R3C0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S4R3C0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
S4R3C0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
S4R3C0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
S4R3C0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms