Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MCRIP2P1-201ENST00000394346 511 ntBASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 MIPEPP3-201ENST00000412105 444 ntBASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 AC142086.2-201ENST00000569753 217 ntBASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP4B1Q9Y6B7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP4B1Q9Y6B7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
AP4B1Q9Y6B7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP4B1Q9Y6B7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP4B1Q9Y6B7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
AP4B1Q9Y6B7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.52■□□□□ 0.55
AP4B1Q9Y6B7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.52■□□□□ 0.55
AP4B1Q9Y6B7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 AL355802.2-201ENST00000402069 882 ntBASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 MIR4758-201ENST00000577688 71 ntBASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
AP4B1Q9Y6B7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 CYP2T3P-201ENST00000601990 817 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms