Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 RBM17P1-201ENST00000453646 1190 ntBASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 Z85996.1-201ENST00000494644 937 ntBASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 BX088651.1-201ENST00000540551 451 ntBASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 RCC2P6-201ENST00000526625 1557 ntBASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.72■□□□□ 0.91
SNX9Q9Y5X1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 AL158211.5-201ENST00000623583 2518 ntBASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 ZNF815P-204ENST00000434898 1737 ntBASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 UNC93B2-201ENST00000285383 730 ntBASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX9Q9Y5X1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.7■□□□□ 0.91
SNX9Q9Y5X1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX9Q9Y5X1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 AC079598.2-202ENST00000546624 1451 ntBASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 AC004951.3-201ENST00000418645 1148 ntBASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 AP000525.1-201ENST00000608286 694 ntBASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 AC011298.2-201ENST00000617989 482 ntBASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 AC073912.3-201ENST00000624414 853 ntBASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 AC104417.2-201ENST00000562989 1793 ntBASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX9Q9Y5X1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX9Q9Y5X1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms