Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 C1QL1P1-201ENST00000568105 661 ntBASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 AL445675.2-201ENST00000620291 557 ntBASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 PLK5-205ENST00000642079 1969 ntBASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 AC005521.1-201ENST00000393351 872 ntBASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 AC010947.1-201ENST00000623454 693 ntBASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA3Q9Y5H0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PCDHGA3Q9Y5H0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA3Q9Y5H0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGA3Q9Y5H0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA3Q9Y5H0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 KRT18P35-201ENST00000510488 1269 ntBASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 AL049597.2-201ENST00000565575 961 ntBASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 CYP2D8P-201ENST00000433633 1490 ntBASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 FSCN1P1-201ENST00000568912 1481 ntBASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA3Q9Y5H0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 SMG8-203ENST00000578922 2178 ntBASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 LETM1P2-201ENST00000597330 2178 ntBASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA3Q9Y5H0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA3Q9Y5H0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms