Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA4Q9Y5G9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA4Q9Y5G9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA4Q9Y5G9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms