Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 WWOX-216ENST00000569818 525 ntBASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PCDHGA9Q9Y5G4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA9Q9Y5G4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA9Q9Y5G4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA9Q9Y5G4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA9Q9Y5G4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA9Q9Y5G4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 AP000692.2-201ENST00000608391 879 ntBASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 FAM87A-204ENST00000613235 858 ntBASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 AC130371.2-201ENST00000619443 611 ntBASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 AC007225.1-201ENST00000566331 1836 ntBASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 AC018553.1-201ENST00000616682 1458 ntBASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 AL162377.1-201ENST00000618844 1793 ntBASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA9Q9Y5G4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 HMGA1P5-201ENST00000412453 271 ntBASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA9Q9Y5G4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 AK4P3-201ENST00000418260 669 ntBASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms