Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHB13Q9Y5F0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 Z82202.1-201ENST00000623446 1880 ntBASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 AL158047.1-201ENST00000445918 881 ntBASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 UBE2SP1-201ENST00000450587 669 ntBASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB13Q9Y5F0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 HTR7P1-201ENST00000538670 1336 ntBASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 RARRES2P10-201ENST00000564312 460 ntBASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB13Q9Y5F0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 AC104417.2-201ENST00000562989 1793 ntBASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 HLA-A-209ENST00000638375 975 ntBASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
PCDHB13Q9Y5F0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHB13Q9Y5F0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.33■■□□□ 1
PCDHB13Q9Y5F0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 AL353807.1-201ENST00000427475 662 ntBASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 AL353708.3-201ENST00000610272 989 ntBASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms