Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 HLA-B-256ENST00000639848 1089 ntBASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 AC116351.2-201ENST00000606540 1585 ntBASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 AC142086.2-201ENST00000569753 217 ntBASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RHBDD3Q9Y3P4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 AC124283.5-201ENST00000624661 1809 ntBASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 PNMA6B-201ENST00000538162 1200 ntBASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDD3Q9Y3P4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 AL355802.2-201ENST00000402069 882 ntBASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 HLA-L-209ENST00000420110 1011 ntBASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 AC060766.5-201ENST00000590539 871 ntBASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDD3Q9Y3P4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms