Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
CDK11AQ9UQ88 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDK11AQ9UQ88 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDK11AQ9UQ88 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CDK11AQ9UQ88 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 VENTXP5-201ENST00000523979 775 ntBASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 AC069148.1-201ENST00000608741 768 ntBASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
CDK11AQ9UQ88 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 DUSP5P1-201ENST00000441325 1139 ntBASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 AC112907.2-201ENST00000448639 330 ntBASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 CD81-212ENST00000526072 1172 ntTSL 5 BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 DFFB-212ENST00000625756 649 ntTSL 5 BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDK11AQ9UQ88 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 IPPK-202ENST00000375522 882 ntTSL 3 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 ZNF444P1-201ENST00000559497 298 ntBASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 WDR88-203ENST00000592765 651 ntTSL 5 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 AC083849.1-201ENST00000615227 514 ntBASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 HYMAI.1-201ENST00000620949 238 ntBASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDK11AQ9UQ88 AL691432.2-201ENST00000607222 2038 ntBASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC29.89■■■□□ 2.38
CDK11AQ9UQ88 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC29.89■■■□□ 2.37
CDK11AQ9UQ88 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CDK11AQ9UQ88 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 HCG4P8-203ENST00000443049 980 ntBASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 GCSHP2-201ENST00000560971 527 ntBASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC29.88■■■□□ 2.37
CDK11AQ9UQ88 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 AL121894.2-201ENST00000602977 491 ntBASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDK11AQ9UQ88 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms