Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 AL136116.3-201ENST00000402907 1138 ntBASIC17.26■□□□□ 0.35
SSR3Q9UNL2 AL356441.2-201ENST00000443009 864 ntBASIC17.26■□□□□ 0.35
SSR3Q9UNL2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 AP001160.3-201ENST00000601484 763 ntBASIC17.26■□□□□ 0.35
SSR3Q9UNL2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR3Q9UNL2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 PHGDH-210ENST00000641115 1638 ntBASIC17.25■□□□□ 0.35
SSR3Q9UNL2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 AC068880.1-201ENST00000507289 2297 ntBASIC17.25■□□□□ 0.35
SSR3Q9UNL2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR3Q9UNL2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.24■□□□□ 0.35
SSR3Q9UNL2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSR3Q9UNL2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SSR3Q9UNL2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms