Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 KRT17P3-201ENST00000420566 1262 ntBASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 UBE2SP1-201ENST00000450587 669 ntBASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 C2orf69P4-201ENST00000565394 541 ntBASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.83■□□□□ 0.77
RABGEF1Q9UJ41 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RABGEF1Q9UJ41 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.83■□□□□ 0.76
RABGEF1Q9UJ41 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RABGEF1Q9UJ41 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RABGEF1Q9UJ41 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RABGEF1Q9UJ41 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RABGEF1Q9UJ41 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 AC023632.3-201ENST00000521633 145 ntBASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 RN7SL471P-201ENST00000580476 299 ntBASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 AC069544.1-201ENST00000609399 999 ntBASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RABGEF1Q9UJ41 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 NEFHP1-201ENST00000412845 2629 ntBASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 AL138781.2-201ENST00000617896 1843 ntBASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RABGEF1Q9UJ41 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 FAM197Y4-202ENST00000622692 608 ntBASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RABGEF1Q9UJ41 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms