Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NCDNQ9UBB6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 AC005229.4-201ENST00000610085 2198 ntBASIC19.2■□□□□ 0.66
NCDNQ9UBB6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 AL645929.1-201ENST00000420084 975 ntBASIC19.2■□□□□ 0.66
NCDNQ9UBB6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 IFNL4P1-201ENST00000607083 540 ntBASIC19.2■□□□□ 0.66
NCDNQ9UBB6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 AC018553.1-201ENST00000616682 1458 ntBASIC19.2■□□□□ 0.66
NCDNQ9UBB6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.2■□□□□ 0.66
NCDNQ9UBB6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 GCSHP2-201ENST00000560971 527 ntBASIC19.19■□□□□ 0.66
NCDNQ9UBB6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCDNQ9UBB6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 TSSC2-201ENST00000450217 709 ntBASIC19.18■□□□□ 0.66
NCDNQ9UBB6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 NEK4P2-201ENST00000580004 1012 ntBASIC19.18■□□□□ 0.66
NCDNQ9UBB6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCDNQ9UBB6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 BX276092.5-203ENST00000456199 560 ntBASIC19.17■□□□□ 0.66
NCDNQ9UBB6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCDNQ9UBB6 KRT16P6-202ENST00000425692 1426 ntBASIC19.17■□□□□ 0.66
NCDNQ9UBB6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCDNQ9UBB6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NCDNQ9UBB6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.16■□□□□ 0.66
NCDNQ9UBB6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCDNQ9UBB6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCDNQ9UBB6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms