Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 AC010653.2-201ENST00000623505 997 ntBASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NLGN3Q9NZ94 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NLGN3Q9NZ94 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 AC073314.1-201ENST00000568729 2216 ntBASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 AC022616.7-201ENST00000525383 220 ntBASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.92■□□□□ 0.62
NLGN3Q9NZ94 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 AC063952.2-201ENST00000498792 1227 ntBASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 AL160286.2-201ENST00000567150 934 ntBASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 RNF165-205ENST00000588679 2904 ntBASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NLGN3Q9NZ94 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms