Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 KRT8P8-201ENST00000434750 1448 ntBASIC19.11■□□□□ 0.65
MKS1Q9NXB0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 FEM1AP3-201ENST00000403722 1741 ntBASIC19.11■□□□□ 0.65
MKS1Q9NXB0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.1■□□□□ 0.65
MKS1Q9NXB0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 AC083906.6-201ENST00000641366 219 ntBASIC19.1■□□□□ 0.65
MKS1Q9NXB0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.1■□□□□ 0.65
MKS1Q9NXB0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 AL390719.1-204ENST00000412397 1219 ntBASIC19.09■□□□□ 0.65
MKS1Q9NXB0 YBX1P10-201ENST00000444752 975 ntBASIC19.09■□□□□ 0.65
MKS1Q9NXB0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.09■□□□□ 0.65
MKS1Q9NXB0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MKS1Q9NXB0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 AC133552.2-202ENST00000575694 574 ntBASIC19.08■□□□□ 0.64
MKS1Q9NXB0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.08■□□□□ 0.64
MKS1Q9NXB0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKS1Q9NXB0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 AC120498.9-201ENST00000339021 3867 ntBASIC19.07■□□□□ 0.64
MKS1Q9NXB0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms