Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 ABHD17AP1-201ENST00000358206 933 ntBASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN4Q9NRR5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.78■□□□□ 0.44
UBQLN4Q9NRR5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 AL353807.1-201ENST00000427475 662 ntBASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 AC142381.4-202ENST00000563973 229 ntBASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 HLA-A-209ENST00000638375 975 ntBASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN4Q9NRR5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBQLN4Q9NRR5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
UBQLN4Q9NRR5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBQLN4Q9NRR5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN4Q9NRR5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms