Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TLR9Q9NR96 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TLR9Q9NR96 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TLR9Q9NR96 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TLR9Q9NR96 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TLR9Q9NR96 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TLR9Q9NR96 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TLR9Q9NR96 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TLR9Q9NR96 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 AL450487.1-201ENST00000426799 995 ntBASIC20.53■□□□□ 0.88
TLR9Q9NR96 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 VENTXP5-201ENST00000523979 775 ntBASIC20.53■□□□□ 0.88
TLR9Q9NR96 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.53■□□□□ 0.88
TLR9Q9NR96 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.52■□□□□ 0.88
TLR9Q9NR96 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.52■□□□□ 0.88
TLR9Q9NR96 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.52■□□□□ 0.88
TLR9Q9NR96 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.52■□□□□ 0.88
TLR9Q9NR96 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.52■□□□□ 0.88
TLR9Q9NR96 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.52■□□□□ 0.88
TLR9Q9NR96 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR9Q9NR96 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TLR9Q9NR96 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
TLR9Q9NR96 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TLR9Q9NR96 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TLR9Q9NR96 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR9Q9NR96 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR9Q9NR96 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR9Q9NR96 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TLR9Q9NR96 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR9Q9NR96 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR9Q9NR96 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.51■□□□□ 0.87
TLR9Q9NR96 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 AL136038.3-201ENST00000561909 1096 ntBASIC20.51■□□□□ 0.87
TLR9Q9NR96 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR9Q9NR96 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR9Q9NR96 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.51■□□□□ 0.87
TLR9Q9NR96 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.5■□□□□ 0.87
TLR9Q9NR96 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR9Q9NR96 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 FEM1AP1-201ENST00000431297 1995 ntBASIC20.49■□□□□ 0.87
TLR9Q9NR96 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.49■□□□□ 0.87
TLR9Q9NR96 AC112907.2-201ENST00000448639 330 ntBASIC20.49■□□□□ 0.87
TLR9Q9NR96 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 CLEC4GP1-201ENST00000596555 870 ntBASIC20.49■□□□□ 0.87
TLR9Q9NR96 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms