Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 KRT8P45-201ENST00000414328 1447 ntBASIC22.86■■□□□ 1.25
DDX4Q9NQI0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 AL031133.1-201ENST00000406807 723 ntBASIC22.85■■□□□ 1.25
DDX4Q9NQI0 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.85■■□□□ 1.25
DDX4Q9NQI0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX4Q9NQI0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 PRSS44-201ENST00000515154 1146 ntBASIC22.84■■□□□ 1.25
DDX4Q9NQI0 AL441883.1-201ENST00000566170 1045 ntBASIC22.84■■□□□ 1.25
DDX4Q9NQI0 AL023973.1-201ENST00000624619 620 ntBASIC22.84■■□□□ 1.25
DDX4Q9NQI0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
DDX4Q9NQI0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 AL358472.4-201ENST00000633140 710 ntBASIC22.83■■□□□ 1.25
DDX4Q9NQI0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.83■■□□□ 1.25
DDX4Q9NQI0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.83■■□□□ 1.24
DDX4Q9NQI0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.83■■□□□ 1.24
DDX4Q9NQI0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
DDX4Q9NQI0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.83■■□□□ 1.24
DDX4Q9NQI0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms