Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 AC098818.2-201ENST00000564925 2320 ntBASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE5Q9HCH3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 AC006128.1-201ENST00000624704 1661 ntBASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 AC022616.7-201ENST00000525383 220 ntBASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 KRT126P-201ENST00000549467 1181 ntBASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 C2orf69P3-201ENST00000565542 1120 ntBASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 MIR2861-201ENST00000636310 90 ntBASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE5Q9HCH3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 PCDHAC2-203ENST00000615316 3011 ntBASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE5Q9HCH3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
CPNE5Q9HCH3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CPNE5Q9HCH3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CPNE5Q9HCH3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE5Q9HCH3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CPNE5Q9HCH3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE5Q9HCH3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE5Q9HCH3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms