Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 KRT18P6-201ENST00000555540 1265 ntBASIC18.5■□□□□ 0.55
BRF2Q9HAW0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 AC004264.1-201ENST00000608354 794 ntBASIC18.5■□□□□ 0.55
BRF2Q9HAW0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 AL161938.1-201ENST00000569833 2180 ntBASIC18.49■□□□□ 0.55
BRF2Q9HAW0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 C1QL1P1-201ENST00000568105 661 ntBASIC18.47■□□□□ 0.55
BRF2Q9HAW0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms