Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 KRT18P6-201ENST00000555540 1265 ntBASIC18.5■□□□□ 0.55
BRF2Q9HAW0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 AC004264.1-201ENST00000608354 794 ntBASIC18.5■□□□□ 0.55
BRF2Q9HAW0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 AL161938.1-201ENST00000569833 2180 ntBASIC18.49■□□□□ 0.55
BRF2Q9HAW0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRF2Q9HAW0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRF2Q9HAW0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 C1QL1P1-201ENST00000568105 661 ntBASIC18.47■□□□□ 0.55
BRF2Q9HAW0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms