Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.23■□□□□ 0.99
VPS16Q9H269 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
VPS16Q9H269 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.23■□□□□ 0.99
VPS16Q9H269 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VPS16Q9H269 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VPS16Q9H269 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VPS16Q9H269 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
VPS16Q9H269 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 AL138781.2-201ENST00000617896 1843 ntBASIC21.22■□□□□ 0.99
VPS16Q9H269 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS16Q9H269 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS16Q9H269 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
VPS16Q9H269 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS16Q9H269 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.22■□□□□ 0.99
VPS16Q9H269 GUSBP6-202ENST00000438529 1198 ntBASIC21.22■□□□□ 0.99
VPS16Q9H269 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
VPS16Q9H269 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS16Q9H269 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS16Q9H269 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS16Q9H269 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS16Q9H269 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS16Q9H269 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS16Q9H269 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS16Q9H269 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS16Q9H269 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
VPS16Q9H269 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS16Q9H269 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS16Q9H269 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS16Q9H269 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS16Q9H269 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.21■□□□□ 0.99
VPS16Q9H269 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
VPS16Q9H269 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS16Q9H269 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
VPS16Q9H269 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VPS16Q9H269 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS16Q9H269 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.2■□□□□ 0.99
VPS16Q9H269 AC104417.2-201ENST00000562989 1793 ntBASIC21.2■□□□□ 0.99
VPS16Q9H269 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
VPS16Q9H269 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS16Q9H269 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.2■□□□□ 0.98
VPS16Q9H269 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS16Q9H269 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
VPS16Q9H269 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS16Q9H269 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS16Q9H269 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS16Q9H269 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS16Q9H269 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VPS16Q9H269 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms