Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 MIR1238-201ENST00000408483 83 ntBASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 AC087499.1-201ENST00000418141 1075 ntBASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
POLR3FQ9H1D9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.33■■□□□ 1
POLR3FQ9H1D9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.33■■□□□ 1
POLR3FQ9H1D9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 AL158211.5-201ENST00000623583 2518 ntBASIC21.32■■□□□ 1
POLR3FQ9H1D9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 DGCR10-201ENST00000609839 495 ntBASIC21.32■■□□□ 1
POLR3FQ9H1D9 KRT8P41-201ENST00000533985 1514 ntBASIC21.32■■□□□ 1
POLR3FQ9H1D9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3FQ9H1D9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.32■■□□□ 1
POLR3FQ9H1D9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 KRT8P9-201ENST00000558927 1449 ntBASIC21.31■■□□□ 1
POLR3FQ9H1D9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 MMP23A-201ENST00000234610 1017 ntBASIC21.31■■□□□ 1
POLR3FQ9H1D9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 FAM207BP-201ENST00000447172 505 ntBASIC21.31■■□□□ 1
POLR3FQ9H1D9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3FQ9H1D9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.31■■□□□ 1
POLR3FQ9H1D9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 SDHAP1-207ENST00000440850 2000 ntBASIC21.3■■□□□ 1
POLR3FQ9H1D9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 AP000692.2-201ENST00000608391 879 ntBASIC21.3■■□□□ 1
POLR3FQ9H1D9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms