Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 KRT18P1-202ENST00000452408 1331 ntBASIC19.55■□□□□ 0.72
PHOX2BQ99453 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 PMS2P1-201ENST00000431037 1228 ntBASIC19.55■□□□□ 0.72
PHOX2BQ99453 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.55■□□□□ 0.72
PHOX2BQ99453 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.55■□□□□ 0.72
PHOX2BQ99453 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.55■□□□□ 0.72
PHOX2BQ99453 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.55■□□□□ 0.72
PHOX2BQ99453 AL512604.3-201ENST00000569583 964 ntBASIC19.55■□□□□ 0.72
PHOX2BQ99453 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.55■□□□□ 0.72
PHOX2BQ99453 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 BX640515.1-201ENST00000617215 977 ntBASIC19.55■□□□□ 0.72
PHOX2BQ99453 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PHOX2BQ99453 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHOX2BQ99453 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 AL590627.1-203ENST00000421194 1026 ntBASIC19.54■□□□□ 0.72
PHOX2BQ99453 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.54■□□□□ 0.72
PHOX2BQ99453 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHOX2BQ99453 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.53■□□□□ 0.72
PHOX2BQ99453 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 AP002383.4-201ENST00000442518 975 ntBASIC19.53■□□□□ 0.72
PHOX2BQ99453 NUS1P1-201ENST00000446295 882 ntBASIC19.53■□□□□ 0.72
PHOX2BQ99453 TSSC2-201ENST00000450217 709 ntBASIC19.53■□□□□ 0.72
PHOX2BQ99453 TSPY17P-201ENST00000450329 467 ntBASIC19.53■□□□□ 0.72
PHOX2BQ99453 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 AL353719.1-201ENST00000566847 864 ntBASIC19.53■□□□□ 0.72
PHOX2BQ99453 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PHOX2BQ99453 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHOX2BQ99453 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PHOX2BQ99453 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.52■□□□□ 0.72
PHOX2BQ99453 HLA-A-201ENST00000376802 1334 ntBASIC19.52■□□□□ 0.72
PHOX2BQ99453 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
PHOX2BQ99453 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHOX2BQ99453 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHOX2BQ99453 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PHOX2BQ99453 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PHOX2BQ99453 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHOX2BQ99453 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHOX2BQ99453 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.52■□□□□ 0.72
PHOX2BQ99453 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.52■□□□□ 0.72
PHOX2BQ99453 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHOX2BQ99453 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHOX2BQ99453 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHOX2BQ99453 TSPY19P-201ENST00000418461 509 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms