Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21■□□□□ 0.95
ACAP3Q96P50 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21■□□□□ 0.95
ACAP3Q96P50 DGCR10-201ENST00000609839 495 ntBASIC21■□□□□ 0.95
ACAP3Q96P50 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21■□□□□ 0.95
ACAP3Q96P50 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21■□□□□ 0.95
ACAP3Q96P50 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21■□□□□ 0.95
ACAP3Q96P50 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21■□□□□ 0.95
ACAP3Q96P50 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21■□□□□ 0.95
ACAP3Q96P50 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACAP3Q96P50 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21■□□□□ 0.95
ACAP3Q96P50 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21■□□□□ 0.95
ACAP3Q96P50 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.99■□□□□ 0.95
ACAP3Q96P50 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ACAP3Q96P50 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 ECEL1P3-201ENST00000427961 737 ntBASIC20.99■□□□□ 0.95
ACAP3Q96P50 AC008040.2-201ENST00000461049 708 ntBASIC20.99■□□□□ 0.95
ACAP3Q96P50 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.99■□□□□ 0.95
ACAP3Q96P50 FITM1-202ENST00000559294 800 ntBASIC20.99■□□□□ 0.95
ACAP3Q96P50 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.99■□□□□ 0.95
ACAP3Q96P50 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.99■□□□□ 0.95
ACAP3Q96P50 AP000692.2-201ENST00000608391 879 ntBASIC20.99■□□□□ 0.95
ACAP3Q96P50 AC133561.5-201ENST00000635547 218 ntBASIC20.99■□□□□ 0.95
ACAP3Q96P50 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACAP3Q96P50 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.99■□□□□ 0.95
ACAP3Q96P50 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.98■□□□□ 0.95
ACAP3Q96P50 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.98■□□□□ 0.95
ACAP3Q96P50 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.98■□□□□ 0.95
ACAP3Q96P50 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 AL390955.1-201ENST00000428694 934 ntBASIC20.98■□□□□ 0.95
ACAP3Q96P50 AC091390.4-202ENST00000476426 537 ntBASIC20.98■□□□□ 0.95
ACAP3Q96P50 AC097488.1-201ENST00000507834 756 ntBASIC20.98■□□□□ 0.95
ACAP3Q96P50 LINC01023-201ENST00000606054 436 ntBASIC20.98■□□□□ 0.95
ACAP3Q96P50 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.98■□□□□ 0.95
ACAP3Q96P50 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.98■□□□□ 0.95
ACAP3Q96P50 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ACAP3Q96P50 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.98■□□□□ 0.95
ACAP3Q96P50 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACAP3Q96P50 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 FAM207BP-201ENST00000447172 505 ntBASIC20.97■□□□□ 0.95
ACAP3Q96P50 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ACAP3Q96P50 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACAP3Q96P50 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.96■□□□□ 0.95
ACAP3Q96P50 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms