Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.41■□□□□ 0.22
SPG11Q96JI7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.41■□□□□ 0.22
SPG11Q96JI7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPG11Q96JI7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPG11Q96JI7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPG11Q96JI7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPG11Q96JI7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 AP003041.3-201ENST00000527151 707 ntBASIC16.4■□□□□ 0.22
SPG11Q96JI7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 KRT16P6-202ENST00000425692 1426 ntBASIC16.4■□□□□ 0.22
SPG11Q96JI7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.4■□□□□ 0.22
SPG11Q96JI7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPG11Q96JI7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
SPG11Q96JI7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 ECEL1P1-201ENST00000373592 1742 ntBASIC16.39■□□□□ 0.21
SPG11Q96JI7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 LINC02084-201ENST00000606069 1096 ntBASIC16.39■□□□□ 0.21
SPG11Q96JI7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SPG11Q96JI7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPG11Q96JI7 KRT8P8-201ENST00000434750 1448 ntBASIC16.39■□□□□ 0.21
SPG11Q96JI7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 AL391422.3-201ENST00000603791 2761 ntBASIC16.38■□□□□ 0.21
SPG11Q96JI7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 AL022342.1-201ENST00000400363 863 ntBASIC16.38■□□□□ 0.21
SPG11Q96JI7 AC112907.2-201ENST00000448639 330 ntBASIC16.38■□□□□ 0.21
SPG11Q96JI7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 AC092119.3-201ENST00000612618 583 ntBASIC16.38■□□□□ 0.21
SPG11Q96JI7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 PHGDH-210ENST00000641115 1638 ntBASIC16.38■□□□□ 0.21
SPG11Q96JI7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPG11Q96JI7 AC006128.1-201ENST00000624704 1661 ntBASIC16.38■□□□□ 0.21
SPG11Q96JI7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.38■□□□□ 0.21
SPG11Q96JI7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPG11Q96JI7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.37■□□□□ 0.21
SPG11Q96JI7 BX119927.1-201ENST00000636596 1552 ntBASIC16.37■□□□□ 0.21
SPG11Q96JI7 AC026310.3-201ENST00000625186 2373 ntBASIC16.37■□□□□ 0.21
SPG11Q96JI7 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms