Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE2Q96FN4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE2Q96FN4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE2Q96FN4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 GPX1P1-201ENST00000388829 606 ntBASIC16.78■□□□□ 0.28
CPNE2Q96FN4 AC093787.1-201ENST00000450396 207 ntBASIC16.78■□□□□ 0.28
CPNE2Q96FN4 AL162430.1-201ENST00000480705 870 ntBASIC16.78■□□□□ 0.28
CPNE2Q96FN4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 TNXA-203ENST00000507684 2038 ntBASIC16.78■□□□□ 0.28
CPNE2Q96FN4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE2Q96FN4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 NEFHP1-201ENST00000412845 2629 ntBASIC16.77■□□□□ 0.28
CPNE2Q96FN4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE2Q96FN4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CPNE2Q96FN4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.76■□□□□ 0.27
CPNE2Q96FN4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms