Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHFRQ96EP1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHFRQ96EP1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHFRQ96EP1 KRT18P38-201ENST00000449496 1282 ntBASIC19.7■□□□□ 0.74
CHFRQ96EP1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHFRQ96EP1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.7■□□□□ 0.74
CHFRQ96EP1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.7■□□□□ 0.74
CHFRQ96EP1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.7■□□□□ 0.74
CHFRQ96EP1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CHFRQ96EP1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.7■□□□□ 0.74
CHFRQ96EP1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHFRQ96EP1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHFRQ96EP1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHFRQ96EP1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHFRQ96EP1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHFRQ96EP1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHFRQ96EP1 AC009237.14-201ENST00000609975 1594 ntBASIC19.7■□□□□ 0.74
CHFRQ96EP1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.69■□□□□ 0.74
CHFRQ96EP1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHFRQ96EP1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHFRQ96EP1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHFRQ96EP1 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.69■□□□□ 0.74
CHFRQ96EP1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHFRQ96EP1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHFRQ96EP1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHFRQ96EP1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHFRQ96EP1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHFRQ96EP1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.69■□□□□ 0.74
CHFRQ96EP1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 AL359075.1-203ENST00000462729 1002 ntBASIC19.68■□□□□ 0.74
CHFRQ96EP1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 AP000550.4-202ENST00000639755 178 ntBASIC19.68■□□□□ 0.74
CHFRQ96EP1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHFRQ96EP1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHFRQ96EP1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 PCED1CP-201ENST00000419887 785 ntBASIC19.67■□□□□ 0.74
CHFRQ96EP1 AC009947.2-201ENST00000444014 672 ntBASIC19.67■□□□□ 0.74
CHFRQ96EP1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 AL121956.5-201ENST00000625261 221 ntBASIC19.67■□□□□ 0.74
CHFRQ96EP1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.67■□□□□ 0.74
CHFRQ96EP1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHFRQ96EP1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHFRQ96EP1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CHFRQ96EP1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHFRQ96EP1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.66■□□□□ 0.74
CHFRQ96EP1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHFRQ96EP1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHFRQ96EP1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHFRQ96EP1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms