Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 AC092368.3-202ENST00000574180 1591 ntBASIC19.53■□□□□ 0.72
LRRC39Q96DD0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 KRT18P16-201ENST00000510337 1294 ntBASIC19.53■□□□□ 0.72
LRRC39Q96DD0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 MYC-209ENST00000641252 345 ntBASIC19.53■□□□□ 0.72
LRRC39Q96DD0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC39Q96DD0 AC093525.10-201ENST00000625130 1569 ntBASIC19.53■□□□□ 0.72
LRRC39Q96DD0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.52■□□□□ 0.72
LRRC39Q96DD0 GUSBP6-202ENST00000438529 1198 ntBASIC19.52■□□□□ 0.72
LRRC39Q96DD0 AC097658.1-201ENST00000475555 843 ntBASIC19.52■□□□□ 0.72
LRRC39Q96DD0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 AC060766.5-201ENST00000590539 871 ntBASIC19.52■□□□□ 0.72
LRRC39Q96DD0 AL121829.2-201ENST00000620908 328 ntBASIC19.52■□□□□ 0.72
LRRC39Q96DD0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC39Q96DD0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC39Q96DD0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC39Q96DD0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC39Q96DD0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC39Q96DD0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 TSPY6P-201ENST00000448518 926 ntBASIC19.51■□□□□ 0.71
LRRC39Q96DD0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC39Q96DD0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 NCF1B-203ENST00000435988 1254 ntBASIC19.5■□□□□ 0.71
LRRC39Q96DD0 PNMA6B-201ENST00000538162 1200 ntBASIC19.5■□□□□ 0.71
LRRC39Q96DD0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms