Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.88■□□□□ 0.29
USP9XQ93008 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.88■□□□□ 0.29
USP9XQ93008 AC239800.4-201ENST00000603712 296 ntBASIC16.88■□□□□ 0.29
USP9XQ93008 AL773604.1-201ENST00000617417 272 ntBASIC16.88■□□□□ 0.29
USP9XQ93008 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.88■□□□□ 0.29
USP9XQ93008 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.88■□□□□ 0.29
USP9XQ93008 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.88■□□□□ 0.29
USP9XQ93008 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
USP9XQ93008 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.88■□□□□ 0.29
USP9XQ93008 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.88■□□□□ 0.29
USP9XQ93008 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.88■□□□□ 0.29
USP9XQ93008 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
USP9XQ93008 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.87■□□□□ 0.29
USP9XQ93008 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.87■□□□□ 0.29
USP9XQ93008 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.87■□□□□ 0.29
USP9XQ93008 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.87■□□□□ 0.29
USP9XQ93008 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.87■□□□□ 0.29
USP9XQ93008 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.87■□□□□ 0.29
USP9XQ93008 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.87■□□□□ 0.29
USP9XQ93008 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.87■□□□□ 0.29
USP9XQ93008 KRT18P67-201ENST00000432816 1264 ntBASIC16.87■□□□□ 0.29
USP9XQ93008 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.87■□□□□ 0.29
USP9XQ93008 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.87■□□□□ 0.29
USP9XQ93008 AC140113.2-201ENST00000604370 208 ntBASIC16.87■□□□□ 0.29
USP9XQ93008 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.87■□□□□ 0.29
USP9XQ93008 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP9XQ93008 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.87■□□□□ 0.29
USP9XQ93008 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.87■□□□□ 0.29
USP9XQ93008 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 MIR662-201ENST00000384847 95 ntBASIC16.86■□□□□ 0.29
USP9XQ93008 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.86■□□□□ 0.29
USP9XQ93008 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.86■□□□□ 0.29
USP9XQ93008 POLD2P1-201ENST00000511220 997 ntBASIC16.86■□□□□ 0.29
USP9XQ93008 MIR4674-201ENST00000582457 87 ntBASIC16.86■□□□□ 0.29
USP9XQ93008 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.86■□□□□ 0.29
USP9XQ93008 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.86■□□□□ 0.29
USP9XQ93008 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.86■□□□□ 0.29
USP9XQ93008 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.86■□□□□ 0.29
USP9XQ93008 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
USP9XQ93008 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 TMEM179-206ENST00000616017 1645 ntBASIC16.86■□□□□ 0.29
USP9XQ93008 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP9XQ93008 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.86■□□□□ 0.29
USP9XQ93008 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.85■□□□□ 0.29
USP9XQ93008 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.85■□□□□ 0.29
USP9XQ93008 PMS2P2-201ENST00000425039 1128 ntBASIC16.85■□□□□ 0.29
USP9XQ93008 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP9XQ93008 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USP9XQ93008 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.85■□□□□ 0.29
USP9XQ93008 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP9XQ93008 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP9XQ93008 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP9XQ93008 AC036111.1-201ENST00000533973 1582 ntBASIC16.85■□□□□ 0.29
USP9XQ93008 TOB2P1-201ENST00000469761 992 ntBASIC16.85■□□□□ 0.29
USP9XQ93008 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USP9XQ93008 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP9XQ93008 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.85■□□□□ 0.29
USP9XQ93008 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
USP9XQ93008 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.85■□□□□ 0.29
USP9XQ93008 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
USP9XQ93008 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP9XQ93008 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP9XQ93008 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP9XQ93008 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
USP9XQ93008 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP9XQ93008 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP9XQ93008 RNF126P1-202ENST00000569893 925 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms