Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TM9SF4Q92544 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TM9SF4Q92544 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.25■□□□□ 0.51
TM9SF4Q92544 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.25■□□□□ 0.51
TM9SF4Q92544 NIFKP9-201ENST00000419265 221 ntBASIC18.25■□□□□ 0.51
TM9SF4Q92544 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.25■□□□□ 0.51
TM9SF4Q92544 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.25■□□□□ 0.51
TM9SF4Q92544 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TM9SF4Q92544 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 AL158211.5-201ENST00000623583 2518 ntBASIC18.24■□□□□ 0.51
TM9SF4Q92544 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 KRT16P1-201ENST00000399124 1418 ntBASIC18.24■□□□□ 0.51
TM9SF4Q92544 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 REXO1L10P-201ENST00000615707 1290 ntBASIC18.24■□□□□ 0.51
TM9SF4Q92544 CR392000.1-201ENST00000624770 1228 ntBASIC18.24■□□□□ 0.51
TM9SF4Q92544 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TM9SF4Q92544 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM9SF4Q92544 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 BX323043.1-201ENST00000641006 1765 ntBASIC18.23■□□□□ 0.51
TM9SF4Q92544 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 AC092720.2-201ENST00000602388 1665 ntBASIC18.23■□□□□ 0.51
TM9SF4Q92544 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 NAPSB-206ENST00000562112 1266 ntBASIC18.23■□□□□ 0.51
TM9SF4Q92544 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 AC092865.7-201ENST00000641832 219 ntBASIC18.23■□□□□ 0.51
TM9SF4Q92544 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 KRT8P17-201ENST00000453110 1448 ntBASIC18.23■□□□□ 0.51
TM9SF4Q92544 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF4Q92544 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TM9SF4Q92544 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 MIR1238-201ENST00000408483 83 ntBASIC18.22■□□□□ 0.51
TM9SF4Q92544 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 AP000525.1-201ENST00000608286 694 ntBASIC18.22■□□□□ 0.51
TM9SF4Q92544 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 MIR6786-201ENST00000616843 113 ntBASIC18.22■□□□□ 0.51
TM9SF4Q92544 AL590326.2-201ENST00000625139 305 ntBASIC18.22■□□□□ 0.51
TM9SF4Q92544 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms