Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
DDX1Q92499 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.63■□□□□ 0.89
DDX1Q92499 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.63■□□□□ 0.89
DDX1Q92499 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
DDX1Q92499 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.63■□□□□ 0.89
DDX1Q92499 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX1Q92499 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DDX1Q92499 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
DDX1Q92499 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DDX1Q92499 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
DDX1Q92499 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
DDX1Q92499 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX1Q92499 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
DDX1Q92499 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX1Q92499 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
DDX1Q92499 PRKY-204ENST00000533551 1019 ntBASIC20.62■□□□□ 0.89
DDX1Q92499 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX1Q92499 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX1Q92499 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX1Q92499 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX1Q92499 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.62■□□□□ 0.89
DDX1Q92499 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX1Q92499 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX1Q92499 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX1Q92499 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX1Q92499 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
DDX1Q92499 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DDX1Q92499 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX1Q92499 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
DDX1Q92499 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX1Q92499 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
DDX1Q92499 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.61■□□□□ 0.89
DDX1Q92499 AC012618.2-201ENST00000428058 849 ntBASIC20.61■□□□□ 0.89
DDX1Q92499 AC141586.3-201ENST00000562166 1838 ntBASIC20.61■□□□□ 0.89
DDX1Q92499 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX1Q92499 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX1Q92499 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX1Q92499 LINC01465-201ENST00000408887 1940 ntBASIC20.61■□□□□ 0.89
DDX1Q92499 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX1Q92499 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DDX1Q92499 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.6■□□□□ 0.89
DDX1Q92499 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.6■□□□□ 0.89
DDX1Q92499 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.6■□□□□ 0.89
DDX1Q92499 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DDX1Q92499 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX1Q92499 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
DDX1Q92499 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX1Q92499 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
DDX1Q92499 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
DDX1Q92499 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
DDX1Q92499 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DDX1Q92499 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX1Q92499 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX1Q92499 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms