Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 MKRN4P-201ENST00000444706 1521 ntBASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 WIZP1-201ENST00000531444 2299 ntBASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 AC005082.1-201ENST00000413042 2259 ntBASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 IRX1P1-201ENST00000438849 1838 ntBASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 AC124283.5-201ENST00000624661 1809 ntBASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC44A1Q8WWI5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 BX276092.2-201ENST00000417668 665 ntBASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 AC090164.3-201ENST00000610780 2143 ntBASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC44A1Q8WWI5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 AF201337.1-201ENST00000520239 748 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms