Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RNF139Q8WU17 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF139Q8WU17 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF139Q8WU17 AL355355.2-201ENST00000442321 338 ntBASIC20.33■□□□□ 0.85
RNF139Q8WU17 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF139Q8WU17 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF139Q8WU17 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.33■□□□□ 0.85
RNF139Q8WU17 MIR4785-201ENST00000585005 73 ntBASIC20.33■□□□□ 0.85
RNF139Q8WU17 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF139Q8WU17 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF139Q8WU17 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF139Q8WU17 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF139Q8WU17 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF139Q8WU17 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF139Q8WU17 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF139Q8WU17 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF139Q8WU17 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 AL445675.2-201ENST00000620291 557 ntBASIC20.32■□□□□ 0.84
RNF139Q8WU17 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RNF139Q8WU17 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF139Q8WU17 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF139Q8WU17 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF139Q8WU17 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF139Q8WU17 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF139Q8WU17 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF139Q8WU17 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 AC026471.5-201ENST00000615068 467 ntBASIC20.31■□□□□ 0.84
RNF139Q8WU17 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF139Q8WU17 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RNF139Q8WU17 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF139Q8WU17 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RNF139Q8WU17 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF139Q8WU17 AC131212.4-201ENST00000623606 975 ntBASIC20.3■□□□□ 0.84
RNF139Q8WU17 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF139Q8WU17 HLA-A-209ENST00000638375 975 ntBASIC20.3■□□□□ 0.84
RNF139Q8WU17 AL031985.4-201ENST00000642138 673 ntBASIC20.3■□□□□ 0.84
RNF139Q8WU17 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
RNF139Q8WU17 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF139Q8WU17 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF139Q8WU17 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF139Q8WU17 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF139Q8WU17 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF139Q8WU17 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF139Q8WU17 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF139Q8WU17 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF139Q8WU17 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF139Q8WU17 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF139Q8WU17 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms