Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 MIR1238-201ENST00000408483 83 ntBASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 AC008040.2-201ENST00000461049 708 ntBASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 AP000525.1-201ENST00000608286 694 ntBASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.94■■□□□ 1.26
NKX2-3Q8TAU0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
NKX2-3Q8TAU0 SDHAP1-207ENST00000440850 2000 ntBASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 AC004980.1-204ENST00000429707 299 ntBASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 SLC25A3P1-201ENST00000443844 931 ntBASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NKX2-3Q8TAU0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 AC104417.2-201ENST00000562989 1793 ntBASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 AC104076.2-201ENST00000448912 469 ntBASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 CR392000.1-201ENST00000624770 1228 ntBASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
NKX2-3Q8TAU0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
NKX2-3Q8TAU0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NKX2-3Q8TAU0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.9■■□□□ 1.26
NKX2-3Q8TAU0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NKX2-3Q8TAU0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.9■■□□□ 1.26
NKX2-3Q8TAU0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NKX2-3Q8TAU0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms