Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD2Q8NHY2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 AC026271.2-201ENST00000428091 497 ntBASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 NOC2LP1-202ENST00000452600 2235 ntBASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD2Q8NHY2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 FZD10-202ENST00000539839 3282 ntBASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 KRT19P1-201ENST00000405746 1186 ntBASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD2Q8NHY2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 AC093525.10-201ENST00000625130 1569 ntBASIC19.08■□□□□ 0.65
RFWD2Q8NHY2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 MIR935-201ENST00000401179 91 ntBASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 KRT18P61-201ENST00000585825 1298 ntBASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 UBE2DNL-204ENST00000602536 740 ntBASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 AC016405.3-201ENST00000607710 860 ntBASIC19.08■□□□□ 0.64
RFWD2Q8NHY2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms