Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 AC141586.3-201ENST00000562166 1838 ntBASIC20.05■□□□□ 0.8
CCDC89Q8N998 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 AL161938.1-201ENST00000569833 2180 ntBASIC20.05■□□□□ 0.8
CCDC89Q8N998 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC89Q8N998 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC89Q8N998 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC89Q8N998 AC083906.2-201ENST00000511578 360 ntBASIC20.04■□□□□ 0.8
CCDC89Q8N998 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC89Q8N998 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC89Q8N998 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC89Q8N998 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 AC092118.2-201ENST00000613495 667 ntBASIC20.03■□□□□ 0.8
CCDC89Q8N998 AC006557.6-201ENST00000623071 864 ntBASIC20.03■□□□□ 0.8
CCDC89Q8N998 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 CROCCP3-202ENST00000420820 1947 ntBASIC20.03■□□□□ 0.8
CCDC89Q8N998 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC89Q8N998 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CCDC89Q8N998 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 SLC29A4P1-201ENST00000398760 971 ntBASIC20.02■□□□□ 0.8
CCDC89Q8N998 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC89Q8N998 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC89Q8N998 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
CCDC89Q8N998 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC89Q8N998 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC89Q8N998 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC89Q8N998 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC89Q8N998 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC89Q8N998 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC89Q8N998 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC89Q8N998 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC89Q8N998 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC89Q8N998 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC89Q8N998 TEX21P-204ENST00000641479 1693 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms