Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 AL353708.3-201ENST00000610272 989 ntBASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC146Q8IYE0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 AC012618.2-201ENST00000428058 849 ntBASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC146Q8IYE0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 AC004980.1-204ENST00000429707 299 ntBASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 CD177P1-201ENST00000606252 935 ntBASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 AC073195.1-201ENST00000607241 877 ntBASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 AP006294.2-201ENST00000641667 209 ntBASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC146Q8IYE0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC146Q8IYE0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC146Q8IYE0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC146Q8IYE0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.64■■□□□ 1.69
CCDC146Q8IYE0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 SNORA78-201ENST00000459373 127 ntBASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 AL445675.2-201ENST00000620291 557 ntBASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC146Q8IYE0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 AL032819.2-201ENST00000624543 2162 ntBASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 AL353807.1-201ENST00000427475 662 ntBASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 KSR1P1-201ENST00000446298 240 ntBASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 KRT16P1-201ENST00000399124 1418 ntBASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CCDC146Q8IYE0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 AC005332.7-201ENST00000614046 2005 ntBASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 AL596275.1-201ENST00000423464 877 ntBASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.61■■□□□ 1.69
CCDC146Q8IYE0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms