Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX60Q8IY21 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX60Q8IY21 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 AC005332.1-201ENST00000577698 1310 ntBASIC23.93■■□□□ 1.42
DDX60Q8IY21 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 TSPY5P-201ENST00000426936 936 ntBASIC23.93■■□□□ 1.42
DDX60Q8IY21 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 BX664615.1-201ENST00000443558 458 ntBASIC23.93■■□□□ 1.42
DDX60Q8IY21 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX60Q8IY21 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX60Q8IY21 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX60Q8IY21 ZNF815P-204ENST00000434898 1737 ntBASIC23.92■■□□□ 1.42
DDX60Q8IY21 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX60Q8IY21 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX60Q8IY21 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX60Q8IY21 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
DDX60Q8IY21 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX60Q8IY21 UPK3BP1-201ENST00000428678 509 ntBASIC23.92■■□□□ 1.42
DDX60Q8IY21 TSPY23P-201ENST00000440136 739 ntBASIC23.92■■□□□ 1.42
DDX60Q8IY21 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.92■■□□□ 1.42
DDX60Q8IY21 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX60Q8IY21 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.92■■□□□ 1.42
DDX60Q8IY21 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
DDX60Q8IY21 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX60Q8IY21 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX60Q8IY21 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX60Q8IY21 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.92■■□□□ 1.42
DDX60Q8IY21 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.91■■□□□ 1.42
DDX60Q8IY21 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.91■■□□□ 1.42
DDX60Q8IY21 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.91■■□□□ 1.42
DDX60Q8IY21 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.91■■□□□ 1.42
DDX60Q8IY21 AC011558.1-201ENST00000623459 338 ntBASIC23.91■■□□□ 1.42
DDX60Q8IY21 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.91■■□□□ 1.42
DDX60Q8IY21 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX60Q8IY21 LINC01006-201ENST00000333319 2292 ntBASIC23.91■■□□□ 1.42
DDX60Q8IY21 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 AC112907.2-201ENST00000448639 330 ntBASIC23.9■■□□□ 1.42
DDX60Q8IY21 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 AP000550.4-202ENST00000639755 178 ntBASIC23.9■■□□□ 1.42
DDX60Q8IY21 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX60Q8IY21 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.9■■□□□ 1.42
DDX60Q8IY21 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
DDX60Q8IY21 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX60Q8IY21 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.89■■□□□ 1.42
DDX60Q8IY21 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX60Q8IY21 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
DDX60Q8IY21 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
DDX60Q8IY21 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.89■■□□□ 1.41
DDX60Q8IY21 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
DDX60Q8IY21 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms