Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 LETM1P2-201ENST00000597330 2178 ntBASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 AC093787.1-201ENST00000450396 207 ntBASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 MKRN4P-201ENST00000444706 1521 ntBASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 PHGDH-210ENST00000641115 1638 ntBASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CRLF3Q8IUI8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.28■□□□□ 0.68
CRLF3Q8IUI8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 HLA-G-202ENST00000376815 851 ntBASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 HLA-G-203ENST00000376818 1127 ntBASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 AC098934.4-201ENST00000564127 592 ntBASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 AL162412.1-201ENST00000567129 965 ntBASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 AL161938.1-201ENST00000569833 2180 ntBASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRLF3Q8IUI8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CRLF3Q8IUI8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRLF3Q8IUI8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms