Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SNHG5-209ENST00000435947 696 ntTSL 212.67□□□□□ -0.386e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC12.1□□□□□ -0.476e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC11.37□□□□□ -0.596e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-210ENST00000453754 401 ntTSL 311.02□□□□□ -0.656e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-206ENST00000428833 641 ntTSL 211.01□□□□□ -0.656e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC10.38□□□□□ -0.756e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-207ENST00000431043 998 ntTSL 210.38□□□□□ -0.756e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-202ENST00000414002 430 ntTSL 28.84□□□□□ -0.996e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-220ENST00000624128 672 ntTSL 28.39□□□□□ -1.076e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC7.84□□□□□ -1.156e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-217ENST00000623650 886 ntTSL 57.66□□□□□ -1.186e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.57□□□□□ -1.366e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.24□□□□□ -1.416e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-216ENST00000623267 374 ntTSL 55.62□□□□□ -1.516e-8■■□□□ 13.9
LARP4Q71RC2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.62□□□□□ -1.516e-8■■□□□ 13.9
LARP4Q71RC2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.42e-73■■□□□ 13.9
LARP4Q71RC2 HBA1-203ENST00000472694 674 ntTSL 1 (best)16.14■□□□□ 0.172e-73■■□□□ 13.9
LARP4Q71RC2 HBA1-202ENST00000397797 504 ntTSL 2 BASIC8.91□□□□□ -0.982e-73■■□□□ 13.9
LARP4Q71RC2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.561e-7■■□□□ 13.9
LARP4Q71RC2 AES-209ENST00000587393 1082 ntTSL 215.26■□□□□ 0.031e-7■■□□□ 13.9
LARP4Q71RC2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.17■□□□□ 0.986e-7■■□□□ 13.9
LARP4Q71RC2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.94■□□□□ 0.786e-7■■□□□ 13.9
LARP4Q71RC2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.736e-7■■□□□ 13.9
LARP4Q71RC2 CERS4-214ENST00000595722 1826 ntTSL 1 (best)19.32■□□□□ 0.686e-7■■□□□ 13.9
LARP4Q71RC2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.56e-7■■□□□ 13.9
LARP4Q71RC2 CERS4-215ENST00000599275 710 ntTSL 216.84■□□□□ 0.296e-7■■□□□ 13.9
LARP4Q71RC2 CERS4-202ENST00000557925 2401 ntTSL 515.29■□□□□ 0.046e-7■■□□□ 13.9
LARP4Q71RC2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.441e-13■■□□□ 13.9
LARP4Q71RC2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.14□□□□□ -0.151e-13■■□□□ 13.9
LARP4Q71RC2 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.961e-13■■□□□ 13.9
LARP4Q71RC2 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.362e-79■■□□□ 13.9
LARP4Q71RC2 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.562e-79■■□□□ 13.9
LARP4Q71RC2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.312e-7■■□□□ 13.9
LARP4Q71RC2 NDUFAB1-203ENST00000562133 503 ntTSL 214.61□□□□□ -0.072e-7■■□□□ 13.9
LARP4Q71RC2 NDUFAB1-202ENST00000484769 843 ntTSL 312.65□□□□□ -0.382e-7■■□□□ 13.9
LARP4Q71RC2 GSE1-204ENST00000411612 872 ntTSL 519.9■□□□□ 0.781e-6■■□□□ 13.9
LARP4Q71RC2 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.381e-6■■□□□ 13.9
LARP4Q71RC2 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.431e-6■■□□□ 13.9
LARP4Q71RC2 FAM182B-205ENST00000478164 992 ntTSL 514.16□□□□□ -0.145e-11■■□□□ 13.9
LARP4Q71RC2 FAM182B-207ENST00000582267 832 ntTSL 512.96□□□□□ -0.335e-11■■□□□ 13.9
LARP4Q71RC2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.272e-29■■□□□ 13.9
LARP4Q71RC2 GAPDH-206ENST00000466525 1720 ntTSL 515.11■□□□□ 0.012e-29■■□□□ 13.9
LARP4Q71RC2 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.46□□□□□ -0.252e-29■■□□□ 13.9
LARP4Q71RC2 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.372e-29■■□□□ 13.9
LARP4Q71RC2 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.52e-29■■□□□ 13.9
LARP4Q71RC2 GAPDH-208ENST00000474249 1333 ntTSL 511.89□□□□□ -0.512e-29■■□□□ 13.9
LARP4Q71RC2 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC10.99□□□□□ -0.652e-29■■□□□ 13.9
LARP4Q71RC2 GAPDH-207ENST00000466588 1363 ntTSL 510.5□□□□□ -0.732e-29■■□□□ 13.9
LARP4Q71RC2 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC10.02□□□□□ -0.812e-29■■□□□ 13.9
LARP4Q71RC2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.89■■■□□ 2.229e-8■■□□□ 13.9
LARP4Q71RC2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.359e-8■■□□□ 13.9
LARP4Q71RC2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.39■□□□□ 0.211e-8■■□□□ 13.9
LARP4Q71RC2 IMPDH2-206ENST00000466147 691 ntTSL 216.16■□□□□ 0.185e-7■■□□□ 13.9
LARP4Q71RC2 IMPDH2-207ENST00000472328 469 ntTSL 316.16■□□□□ 0.185e-7■■□□□ 13.9
LARP4Q71RC2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.49■□□□□ 0.071e-8■■□□□ 13.9
LARP4Q71RC2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.032e-12■■□□□ 13.9
LARP4Q71RC2 ILK-207ENST00000526711 1594 ntTSL 214.6□□□□□ -0.079e-8■■□□□ 13.9
LARP4Q71RC2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.19e-8■■□□□ 13.9
LARP4Q71RC2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.111e-8■■□□□ 13.9
LARP4Q71RC2 IMPDH2-208ENST00000481274 840 ntTSL 214.2□□□□□ -0.145e-7■■□□□ 13.9
LARP4Q71RC2 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.451e-8■■□□□ 13.9
LARP4Q71RC2 IMPDH2-202ENST00000429182 1469 ntTSL 511.95□□□□□ -0.55e-7■■□□□ 13.9
LARP4Q71RC2 IMPDH2-205ENST00000463903 420 ntTSL 211.87□□□□□ -0.515e-7■■□□□ 13.9
LARP4Q71RC2 ILK-215ENST00000537806 1801 ntTSL 5 BASIC11.41□□□□□ -0.589e-8■■□□□ 13.9
LARP4Q71RC2 IMPDH2-201ENST00000326739 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.635e-7■■□□□ 13.9
LARP4Q71RC2 ILK-210ENST00000528995 1559 ntTSL 2 BASIC10.9□□□□□ -0.679e-8■■□□□ 13.9
LARP4Q71RC2 ILK-202ENST00000396751 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.679e-8■■□□□ 13.9
LARP4Q71RC2 ILK-206ENST00000526318 596 ntTSL 39.82□□□□□ -0.849e-8■■□□□ 13.9
LARP4Q71RC2 IMPDH2-209ENST00000484872 643 ntTSL 24.75□□□□□ -1.655e-7■■□□□ 13.9
LARP4Q71RC2 ASPSCR1-220ENST00000585140 447 ntTSL 316.74■□□□□ 0.272e-6■■□□□ 13.8
LARP4Q71RC2 ASPSCR1-214ENST00000582404 534 ntTSL 315.62■□□□□ 0.092e-6■■□□□ 13.8
LARP4Q71RC2 RPS18-236ENST00000490191 996 ntTSL 214.25□□□□□ -0.131e-20■■□□□ 13.8
LARP4Q71RC2 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71e-20■■□□□ 13.8
LARP4Q71RC2 RPS18-233ENST00000474973 589 ntTSL 2 BASIC10.65□□□□□ -0.71e-20■■□□□ 13.8
LARP4Q71RC2 RPS18-234ENST00000476222 685 ntTSL 1 (best)10.65□□□□□ -0.71e-20■■□□□ 13.8
LARP4Q71RC2 RPS18-237ENST00000496813 642 ntTSL 29.58□□□□□ -0.881e-20■■□□□ 13.8
LARP4Q71RC2 RPS18-232ENST00000474626 639 ntTSL 39.58□□□□□ -0.881e-20■■□□□ 13.8
LARP4Q71RC2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.68□□□□□ -0.225e-8■■□□□ 13.8
LARP4Q71RC2 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.275e-8■■□□□ 13.8
LARP4Q71RC2 AKR1C2-204ENST00000460124 2639 ntTSL 57.08□□□□□ -1.285e-8■■□□□ 13.8
LARP4Q71RC2 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC12.23□□□□□ -0.455e-7■■□□□ 13.8
LARP4Q71RC2 ERGIC3-209ENST00000447986 1632 ntTSL 1 (best)12.18□□□□□ -0.463e-7■■□□□ 13.8
LARP4Q71RC2 ERGIC3-211ENST00000461043 728 ntTSL 211.27□□□□□ -0.613e-7■■□□□ 13.8
LARP4Q71RC2 ERGIC3-219ENST00000496172 781 ntTSL 29.57□□□□□ -0.883e-7■■□□□ 13.8
LARP4Q71RC2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.84■■□□□ 1.892e-6■■□□□ 13.8
LARP4Q71RC2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.492e-6■■□□□ 13.8
LARP4Q71RC2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.282e-6■■□□□ 13.8
LARP4Q71RC2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.56□□□□□ -0.242e-6■■□□□ 13.8
LARP4Q71RC2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.16□□□□□ -0.32e-6■■□□□ 13.8
LARP4Q71RC2 AGTRAP-207ENST00000471765 717 ntTSL 37.95□□□□□ -1.142e-6■■□□□ 13.8
LARP4Q71RC2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.16■□□□□ 0.821e-6■■□□□ 13.8
LARP4Q71RC2 FBXO31-204ENST00000565593 2717 ntTSL 519.91■□□□□ 0.781e-6■■□□□ 13.8
LARP4Q71RC2 ASPHD1-204ENST00000563177 775 ntAPPRIS ALT2 TSL 518.76■□□□□ 0.591e-6■■□□□ 13.8
LARP4Q71RC2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.511e-6■■□□□ 13.8
LARP4Q71RC2 FTCD-211ENST00000494498 840 ntTSL 317.84■□□□□ 0.453e-13■■□□□ 13.8
LARP4Q71RC2 FTCD-210ENST00000488577 447 ntTSL 317.84■□□□□ 0.453e-13■■□□□ 13.8
LARP4Q71RC2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.331e-6■■□□□ 13.8
LARP4Q71RC2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.311e-6■■□□□ 13.8
LARP4Q71RC2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.31e-6■■□□□ 13.8
LARP4Q71RC2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.044e-38■■□□□ 13.8
Retrieved 100 of 15,922 protein–RNA pairs in 211.2 ms