Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 HES6-206ENST00000409574 738 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 AL035685.1-201ENST00000636663 812 ntBASIC10.42□□□□□ -0.74
LCA10Q71F78 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
LCA10Q71F78 ERF-202ENST00000440177 2032 ntTSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
LCA10Q71F78 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LCA10Q71F78 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
LCA10Q71F78 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 SYT6-210ENST00000641643 1587 ntBASIC10.41□□□□□ -0.74
LCA10Q71F78 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 GUSBP5-201ENST00000418136 578 ntBASIC10.41□□□□□ -0.74
LCA10Q71F78 QDPR-206ENST00000508623 601 ntTSL 3 BASIC10.41□□□□□ -0.74
LCA10Q71F78 AL512631.2-201ENST00000604634 923 ntBASIC10.41□□□□□ -0.74
LCA10Q71F78 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
LCA10Q71F78 AP006587.3-201ENST00000525742 1516 ntBASIC10.41□□□□□ -0.74
LCA10Q71F78 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LCA10Q71F78 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LCA10Q71F78 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC10.41□□□□□ -0.74
LCA10Q71F78 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LCA10Q71F78 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 AC099778.1-201ENST00000568593 1911 ntBASIC10.41□□□□□ -0.74
LCA10Q71F78 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC10.41□□□□□ -0.74
LCA10Q71F78 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC10.41□□□□□ -0.74
LCA10Q71F78 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
LCA10Q71F78 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LCA10Q71F78 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
LCA10Q71F78 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LCA10Q71F78 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LCA10Q71F78 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
LCA10Q71F78 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LCA10Q71F78 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LCA10Q71F78 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms